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Table 1 Primer sequences, annealing temperature and the expected PCR product size

From: In vitro activity of rhinacanthin analogues against drug resistant Plasmodium falciparum isolates from Northeast Thailand

Primer name

5′-3′ sequences*

Tm

Size (bp) (bp)

PfCYTB33 (F)

ATT TAT GAT ATT TAT TGT AAC TGC

55 °C (1st round PCR)

565

PfCYTB4R (R)

AGT TGG TTA AAC TTC TTT GTT CTG C

CytbY268S-F2 (F)

AGC AGT AAT TTG GAT ATG TGG AGG

58 °C (2nd round PCR)

381

CytB_268Y_RFLP (R) (R) (R)

TTA CTT GGA ACA GTT TTT AAC AAT GC

CytB_268S_RFLP (R)

TTA CTT GGA ACA GTT TTT AAC ACT GC

  1. *Underlined bases indicate the mismatch base introduced in primers in order to generate the NsiI site for wild-type parasite (268Y) and PstI site for mutant (268S) in PCR products. F: forward: R: reverse; Tm: annealing temperature