Table 1 Number of SNPs and unique haplotypes detected by the gametocyte genotyping marker (pfs230) and commonly used blood stage short amplicon markers (sera-2 and ama-1) in whole genome sequences from 95 P. falciparum field isolates collected in Malawi
From: Genotyping Plasmodium falciparum gametocytes using amplicon deep sequencing
Gene ID | Gene Name | Marker Start | Marker End | SNPs | Number of haplotypes | Marker Size |
|---|---|---|---|---|---|---|
Pf3D7_0209000 | pfs230 | 375,686 | 376,086 | 11 | 34 | 400 |
Pf3D7_0207900 | sera-2 | 320,763 | 321,020 | 5 | 18 | 257 |
Pf3D7_1133400 | ama-1 | 1,294,056 | 1,294,456 | 5 | 14 | 400 |