The Drugs for Neglected Diseases initiative was founded in 2003 as a collaborative, patients’ needs-driven, not-for-profit drug research and development (R&D) organization in order to develop new or improved treatments for neglected diseases, such as malaria, leishmaniasis, human African trypanosomiasis and Chagas disease. In 2011, DNDi extended its activities to include projects on paediatric HIV and specific helminth infections. It operates with an alternative model[1] from that utilized by the pharmaceutical industry, where research and development is funded and mainly undertaken in-house with the aim of producing a profitable drug. As a product development partnership, DNDi’s funding is provided by governments and charitable or philanthropic organizations to develop much needed anti-infectives of little commercial interest. The development model is dependent upon strong collaborations and partnerships worldwide, across academia, public health institutes, and the biotechnology and pharmaceutical industries.

The World Health Organization (WHO) estimates that 3.3 billion people were at risk of malaria in 2010, of which 1.2 billion living in the African and Southeast Asian regions were at the highest risk. Approximately 81%, or 174 million (113–239 million) cases were in the African region, with another 13% in the Southeast Asian region; the vast majority (91%) of deaths occur in the African region. Children under five years of age are the worst affected, accounting for approximately 86% of malaria deaths worldwide[2].

In the 1980s, there was a rise in resistance of malaria to chloroquine in many parts of Southeast Asia and South America, and emerging resistance along the east coast of Africa which led to the recommendation by the WHO in 2001[3] to abandon the use of chloroquine worldwide and switch to using artemisinin-based combination therapy (ACT) as first-line treatment for uncomplicated Plasmodium falciparum malaria. Four different forms of ACT were recommended by the WHO: artemether/lumefantrine, artesunate + amodiaquine, artesunate + sulphadoxine/pyrimethamine and artesunate + mefloquine (for areas of low transmission).

Mefloquine (MQ) was originally discovered by the Walter Reed Army Institute of Research. However, although it was not covered by a patent, it was expensive to produce, and there was little initial interest in its development. The UNICEF-UNDP-World Bank-WHO Special Programme for Research and Training in Tropical Diseases (TDR) worked with the pharmaceutical company Hoffmann-la-Roche to develop a cheaper synthetic pathway, and sponsored more than 12 clinical trials in Latin America, Zambia and Thailand, leading to product registration in 1984[4]. Initial successes in clinical trials carried out in Bangkok showed efficacy against multi-resistant P. falciparum[5], and in 1986 the combination of MQ with sulphadoxine/pyrimethamine (MSP) was 98% effective in treating 5,000 patients on the Thai-Burmese border[6]. However, P. falciparum resistance quickly developed, and in 1989 the MSP combination was abandoned[7].

Artemisia, or Qinghaosu, is a traditional Chinese herbal cure that has been used to treat malaria for over a thousand years. Isolated from the leaves of Artemisia annua (annual wormwood), it is a potent anti-malarial. Modern day semi-synthetic analogues have improved its solubility and absorption, and there are now a number of artemisinin derivatives available, including the water-soluble artesunate (AS), which forms part of the arsenal of combination treatments for malaria[8]. Artemisinin derivatives cause rapid clearance of parasites from the blood and a speedy resolution of symptoms, but as they are rapidly cleared from the system they are used in combination with a slower acting drug that kills the remaining parasites over three days of treatment.

Thailand was the first country to implement an artemisinin combination therapy (ACT) regime, following extensive use of MQ with AS along the Thai-Burma border in the early 1990s[9–11], leading to its adoption as national policy for the treatment of uncomplicated malaria in 1994, which continues to this day. Given the growing problem of delayed parasite clearance of P. falciparum malaria in Southeast Asia countries, indicative of artemisinin-resistant malaria, with early evidence confirmed at the Cambodia-Thailand border[12], WHO took the unprecedented step of requesting pharmaceutical companies to immediately halt the production of single-drug, artemisinin-containing tablets in order to protect this class of drugs[13]. Since 2006 WHO has recommended the use of artemisinin-based combination therapy to ensure high cure rates of falciparum malaria and to reduce the spread of drug resistance[14].

A search for suitable combinations of existing malaria drugs to control malaria resistance was carried out in 1998 by TDR, with support from the US Agency for International Development (USAID) and the Wellcome Trust. The resulting data analyses showed a combination of AS and MQ to be a good clinical option in Latin America and Southeast Asia. The WHO technical consultation on anti-malarial drug combination therapy in 2001[3] suggested producing a fixed dosage formulation of ASMQ containing mefloquine at 8 mg/kg to be administered daily over three days[15], in order to optimize the use of co-formulations (AS+MQ). As there was a clear public health need but a lack of research groups willing to invest in its development, the Fixed-dose Artesunate-based Combination Therapy (FACT) consortium, born out of the initial partnership between DNDi and TDR, undertook the development of ASMQ (and AS plus amodiaquine) fixed-dose combinations (FDC)[16, 17]. FACT aimed to produce an affordable and widely available FDC that could be available to treat patients most affected by malaria whilst other potential drugs were still in early development.

The FACT consortium was founded by DNDi and TDR in 2002, and included the Brazilian government-owned pharmaceutical company, Farmanguinhos/Fiocruz, the Université Bordeaux Segalen, Universiti Sains Malaysia, Mahidol University and the Shoklo Malaria Institute in Thailand, the Centre National de Recherche et de Formation sur le Paludisme (CNRFP) in Burkina Faso and the University of Oxford as core members. Partnerships were set up with various industrial, academic, governmental and non-governmental organizations who carried out specific aspects of research, and an advisory committee made up of international experts met annually to advise and ensure all questions related to the worldwide treatment of malaria and the use of ACT were discussed. FACT members also carried out specific research in the development process.

Analytical and bio-analytical methods were developed by Universiti Sains Malaysia and subsequently transferred to Farmanguinhos/Fiocruz. Farmanguinhos performed the preformulation and formulation work required to scale up to industrial scale production. Quality control methods were developed and validated. The Université Bordeaux Segalen financed toxicology and genotoxicology studies performed by Unitox and Genotox in Brazil.

Initial trials with the FDC were conducted by clinical partners across Southeast Asia and Latin America.

A pioneer working relationship was developed with Brazilian regulatory authorities, the Agencia Nacional de Vigilancia Sanitaria (ANVISA), to prepare a dossier for submission for drug registration in the country. Consultation meetings were organized at different phases of the development on the way to the submission of the regulatory dossier (2005–2008).

In order to make the drug more easily accessible in Asia, a technology transfer agreement (2007–2009) enabled the drug manufacturing process to be transferred from its original manufacturer’s, the government-owned pharmaceutical company Farmanguinhos in Brazil, to Cipla Ltd, a generic pharmaceutical company in India. Cipla Ltd manufactured registration batches of the product in 2009, and a prequalification dossier was submitted to WHO in 2010, with members of the FACT team clarifying responses to enquiries.

Artesunate and mefloquine are well known treatments for falciparum malaria in loose combination. Since 2001, the ASMQ combination has been one of the WHO-recommended forms of ACT for first-line treatment to provide adequate cure-rates and delay the development of resistance. DNDi and partners decided to improve this therapy by developing a FDC of ASMQ, as the convenience afforded by reducing tablet numbers to once daily over three days is expected to lead to increased patient compliance and adherence. Such an undertaking required both pharmaceutical and industrial development as well as clinical studies. The subsequent technology transfer from Farmanguinhos, Brazil to Cipla Ltd, India facilitated access in endemic regions of Asia.

Development of a FDC of ASMQ has depended on close collaborations between industrial, academic, governmental and NGO research organizations, involving partnerships with and between developing countries, with independent funding provided by both public (EU’s INCODEV FP5, French AFD, Dutch DGIS, Spanish AECID, Swiss SDC, UK DFID and the European Commission’s EDCTP) and private (Médecins Sans Frontières, MSF) sources. The global cost of the development of ASMQ FDC, including pharmaceutical development costs, clinical studies, technology transfer and some implementation activities, is expected to amount to approximately 15 million Euros. This figure does not include in kind contributions by Farmanguinhos and Cipla Ltd, who contributed to the industrialization of the fixed dose combination.

Clinical development

Artesunate and MQ have been used in combination for over 20 years, involving more than 38,000 patients in 91 studies in 22 countries across Southeast Asia, the Western Pacific, Africa and Latin America[19]. The fixed dose combination of these has been demonstrated to be efficacious and safe for treating uncomplicated malaria in more than 25,000 patients in Thailand, Myanmar, India and in a large intervention study in Brazil (Table 1)[20–26]. Of these, the safety and efficacy study carried out on 500 patients in Thailand was pivotal, with efficacy of the FDC comparable to that of the loose tablet combination, better toleration and a lower incidence of vomiting. In addition, the Myanmar study (808 patients) compared the effectiveness of the four ACT FDCs recommended by WHO at the time and showed the ASMQ FDC to have the highest cure rate and the lowest rate of gametocyte carriage, providing the greatest post-treatment suppression of recurrent falciparum malaria and the most effective suppression of blood-stage Plasmodium vivax malaria[25].

Country	Study type	Phase	n	Primary objective	Major findings
Thailand	HNV, PK and tolerability	1	24	PK and bio-availability of AS and MQ; administered separately and as a coformulation to healthy volunteers and patients	No difference was seen in the bio-equivalence of MQ in the two formulations; although a difference was seen for AS/DHA, this was not concluded to be clinically relevant[20]
	PK, efficacy and safety	2	50	Population PK model of new dosage regime of MQ with AS in loose combination over three days	Splitting the 25 mg/kg dose of MQ into three doses of 8 mg/kg improved oral bio-availability compared to the conventional split-dose regimen results. New regimen was well tolerated and with an equivalent therapeutic response[21]
	PK, efficacy and safety	2b	50	Safety and PK of ASMQ FDC vs non-fixed AS+MQ against multi-drug resistant falciparum malaria in adults	FDC well-tolerated with broadly similar PK profiles to non-fixed AS plus MQ[22]. The observed slowing of heart rate was best explained by malaria resolution[23]
	Efficacy and safety	3	500	ASMQ FDC with separate tablets in adults and children with uncomplicated multidrug-resistant falciparum malaria	Cure rates were 91.9% for the FDC after 63 days, with a lower incidence of vomiting compared to those in the loose tablets group[24]
Myanmar	Competitive Effectiveness	4	808	Effectiveness of five artemisinin combination regimens with or without PQ in uncomplicated falciparum malaria	ASMQ provided the greatest post-treatment suppression of malaria after 63 days, with the addition of PQ substantially reducing transmission potential of malaria[25]
India	Efficacy and safety	3	77	PCR corrected cure rate of ASMQ FDC in adult patients with uncomplicated falciparum malaria	Mean parasite clearance time of 48 hours
Brazil	Intervention study: PK Efficacy and safety	3b/4	23,845	Effectiveness of ASMQ FDC in reducing malaria transmission in the Juruá valley	Early detection of malaria and treatment with ASMQ FDC was feasible and efficacious, significantly reduced the incidence and morbidity of falciparum malaria[26]

Mefloquine has been associated with an increased incidence of nausea, vomiting, dizziness, dysphoria and sleep disturbance in clinical trials[27–47] and adverse reactions of varying severity have been experienced by a number of patients when taking AS and MQ in a loose combination or the FDC, primarily in the first 28 days of treatment. However, WHO[14] notes that mefloquine-related adverse effects are seldom debilitating and where this ACT has been deployed it has been well tolerated. There were no serious adverse effects reported in the Brazilian intervention study involving more than 23,000 patients, including children, confirming the safety of the combination. In addition, ASMQ FDC was designed to provide an optimized, short-term, gastro-intestinal tolerance, reducing the overall risk of vomiting. The risk of increased neuropsychiatric reactions following the use of MQ within 60 days of treatment is not an issue in Southeast Asia, Western Pacific and Latin America, areas with low to medium transmission.

The initial targeting of Southeast Asia and Latin America was based on the low to middle intensity transmission and multidrug resistance forms of malaria in these regions. Further studies involving ASMQ FDC are now ongoing with a number of partners in African countries (Figure1; Table 2), including children and pregnant women, and patients with sickle cell anaemia, which will provide additional information for areas with a different epidemiological profile. A large-scale study in pregnant women is also ongoing in Thailand. Children and pregnant women are among the most vulnerable of those affected by malaria.

Country	Study type	Phase	n	Primary objective
Nigeria	Sickle cell proguanil vs AS+MQ vs SP+AQ	1/2	270	Safety and tolerability of bi-monthly intermittent preventive treatment with AS+MQ or sulphadoxine-pyrimethamine + amodiaquine compared to proguanil for prevention of malaria and related complications in patients with sickle cell anaemia
Amazon Basin	Efficacy	2/3	100	Evaluate the effectiveness of ASMQ FDC to treat uncomplicated falciparum malaria in the Juruá Valley
Burkina Faso	Pregnant women	2/3	48	PK of ASMQ FDC in pregnant women
Burkina Faso, Ghana, Malawi and Zambia	Pregnant women: ASMQ vs DHA-PQ vs ASAQ vs AL	3	3500	Efficacy and safety of four ACTs (artemether-lumefantrine, amodiaquine-artesunate, mefloquine-artesunate and dihydroartemisinin-piperaquine) in pregnant women with P. falciparum malaria
Tanzania, Burkina Faso and Kenya	Efficacy, safety and PK in children ASMQ vs AL	4	940	Efficacy, safety and population pharmacokinetics ASMQ FDC in African children vs artemether-lumefantrine
Thailand	Pregnant women: ASMQ vs DHA-PQ vs AL	3	1,000	Randomized trial of three ACT for malaria in pregnancy (DMA)
Brazil	Efficacy and safety P. vivax: ASMQ+PQ vs CQ+PQ vs AL+PQ	3	264	Efficacy and safety for treating P. vivax: ASMQ+PQ vs CQ+PQ vs AL+PQ

ASMQ FDC could also play a role within the strategy of multiple first-line therapies to delay emergence and spread of disease where, in areas of high transmission, repeat treatments are likely to be necessary within 60 days of the initial treatment. A recent model predicts that in areas with high transmission, combining a gametocytocidal artemisinin derivative with a longer-acting partner drug will protect patients from re-infection and reduce transmission more effectively than some common currently used ACT regimens which are gametocyte-killing but short-acting[48].

Plasmodium vivax is the second most important species causing human malaria, accounting for about 40% of malaria cases worldwide[14]. It is the dominant malaria species outside Africa, prevalent in endemic areas in Asia, Central and South America, Middle East and Oceania but rare in Africa. WHO recommends treating uncomplicated vivax malaria with chloroquine in combination with primaquine, where chloroquine is effective. However, in areas of chloroquine resistance an appropriate ACT (but not artesunate-sulphadoxine/pyrimethamine) combined with primaquine is to be used, particularly where ACT is first line therapy for P. falciparum, although primaquine is counter-indicated with severe glucose-6-phosphate dehydrogenase (G6PD) deficiency. Experience indicates that it is likely that primaquine combined with ASMQ will result in high cure rates against vivax blood stage infection and relapse[49]. In Brazil, the Tropical Pathology Research Institute (IPEPATRO) is studying the efficacy of ASMQ FDC in treating P. vivax malaria compared to chloroquine or artemether-lumefantrine when each is administered with primaquine.

Artesunate and MQ in combination have been adopted as first-line treatment of uncomplicated malaria in several countries in Southeast Asia (Cambodia, Malaysia, Thailand and Myanmar) and South America (Bolivia, Peru, Brazil and Venezuela)[52]. In Brazil, where ASMQ FDC is produced by the government-owned pharmaceutical company Farmanguinhos/Fiocruz, the government provides free treatment to patients. Cipla Ltd has committed to making their product available at pre-agreed, affordable prices.

DNDi and its partners are working towards lowering the price of ASMQ in the future. The Medicines for Malaria Venture (MMV) and DNDi have had a long-standing relationship, which ranges from reciprocal access to high-throughput drug screening results through to joint support of clinical studies. MMV has led a collaborative effort to develop a low-cost process for MQ, together with Development Chemicals Ltd and Creative Chemistry, UK-based process chemistry specialists. As part of its work on developing a single isomer of MQ[55], MMV has developed a significantly cheaper manufacturing process, resulting in a reduction in bulk drug from 1,100 USD/kg to 400 USD/kg.

The development of a semisynthetic artemisinin, prepared from a dihydro-artemisinic acid (DHAA) precursor synthesized by Saccharomyces cerevisiae[56, 57], will be at the lower end of the AS pricing band, so ensuring availability at an optimized cost.

The availability of low-cost versions of AS and MQ will ultimately increase access to the FDC treatment. Pragmatic strategies such as the Affordable Medicines Facility for malaria (AMFm) to subsidize anti-malarials and demand forecasting (PAHO Strategic Fund) should also facilitate access to ACT at affordable prices.

With several quality-assured types of ACT available in the market and very promising combinations in the pipeline, more efforts should be made to use all the available tools towards better control and elimination of malaria.

DNDi was set up as a not-for-profit organization in 2003 in order to address the pressing need for effective treatments for patients with the most neglected tropical diseases, as one of the first Public Private Partnerships (now known as Product Development Partnerships). The development of a FDC of ASMQ was one of its initial projects, and the lessons learnt have had an impact on its approach to drug development which will be applied to the management of other diseases across its portfolio and will require new and different partners according to the development stage of the candidate drugs. Following the successful development of two treatments for malaria (ASMQ and artesunate-amodiaquine), DNDi will finalize the transfer of its malaria treatments to partners by 2014, in line with its recently revised business plan.

This collaborative approach to drug development enabled by independent funding mechanisms and involving partners from across the globe and from a variety of research settings, is a powerful new way to develop drugs for tropical diseases, so making new treatments available to patients in resource-poor settings.